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Chromosomal Integrons are Genetically and Functionally Isolated Units of Genomes

 Paula Blanco , Filipa Trig da Roza , Laura Toribio-Celestino , Lucía García-Pastor , Niccolò Caselli , et al.
2023
Pré-publication, Document de travail pasteur-04305666v1
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Genetic drivers of chromosomal integron stability

 Egill Richard , Baptiste Darracq , Eloi Littner , Claire Vit , Clémence Whiteway , et al.
2022
Pré-publication, Document de travail pasteur-03824759v1
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Cassette recombination dynamics within chromosomal integrons are regulated by toxin-antitoxin systems

 Egill Richard , Baptiste Darracq , Eloi Littner , Claire Vit , Clémence Whiteway , et al.
Science Advances , 2024, 10 (2), pp.eadj3498. ⟨10.1126/sciadv.adj3498⟩
Article dans une revue hal-04397951v1
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Integron cassettes commonly integrate into bacterial genomes via widespread non-classical attG sites

 Céline Loot , Gael A Millot , Egill Richard , Eloi Littner , Claire Vit , et al.
Nature Microbiology, 2024, 9 (1), pp.228-240. ⟨10.1038/s41564-023-01548-y⟩
Article dans une revue pasteur-04384854v1
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Aminoglycoside uptake, stress, and potentiation in Gram-negative bacteria: new therapies with old molecules

 Manon Lang , André Carvalho , Zeynep Baharoglu , Didier Mazel
Microbiology and Molecular Biology Reviews, 2023, ⟨10.1128/mmbr.00036-22⟩
Article dans une revue pasteur-04334889v1
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Differences in Integron Cassette Excision Dynamics Shape a Trade-Off between Evolvability and Genetic Capacitance

 Céline Loot , Aleksandra Nivina , Jean Cury , José Antonio Escudero , Magaly Ducos-Galand , et al.
mBio, 2017, 8 (2), pp.e02296-16. ⟨10.1128/mBio.02296-16⟩
Article dans une revue pasteur-01689524v1
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Sleeping ribosomes: bacterial signaling triggers RaiA mediated persistence to aminoglycosides

 Manon Lang , Evelyne Krin , Chloé Korlowski , Odile Sismeiro , Hugo Varet , et al.
iScience, 2021, pp.103128. ⟨10.1016/j.isci.2021.103128⟩
Article dans une revue pasteur-03349141v1
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Cell cycle-coordinated maintenance of the Vibrio bipartite genome

 Théophile Niault , Jakub Czarnecki , Morgan Lambérioux , Didier Mazel , Marie-Eve Val
EcoSal Plus, 2023, 11 (1), eesp00082022. ⟨10.1128/ecosalplus.esp-0008-2022⟩
Article dans une revue hal-04653967v1
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The coordinated replication of Vibrio cholerae ’s two chromosomes required the acquisition of a unique domain by the RctB initiator

 Florian Fournes , Theophile Niault , Jakub Czarnecki , Alvise Tissier-Visconti , Didier Mazel , et al.
Nucleic Acids Research, 2021, 49 (19), pp.11119-11133. ⟨10.1093/nar/gkab903⟩
Article dans une revue hal-03500868v1
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Primary and promiscuous functions coexist during evolutionary innovation through whole protein domain acquisitions

 José Antonio Escudero , Aleksandra Nivina , Harry Kemble , Céline Loot , Olivier Tenaillon , et al.
eLife, 2020, 9, pp.e58061. ⟨10.7554/eLife.58061⟩
Article dans une revue hal-03084482v1
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Exploring a unique class of flavoenzymes: Identification and biochemical characterization of ribosomal RNA dihydrouridine synthase

 Sabrine Toubdji , Quentin Thullier , Lea-Marie Kilz , Virginie Marchand , Yifeng Yuan , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2024, 121 (32), pp.e2401981121. ⟨10.1073/pnas.2401981121⟩
Article dans une revue hal-04734945v1

Sedentary chromosomal integrons as biobanks of bacterial anti-phage defence systems

 Baptiste Darracq , Eloi Littner , Manon Brunie , Julia Bos , Pierre Alexandre Kaminski , et al.
2024
Pré-publication, Document de travail hal-04783441v1
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Systematic transcriptome analysis allows the identification of new type I and type II Toxin/Antitoxin systems located in the superintegron of Vibrio cholerae

 Evelyne Krin , Zeynep Baharoglu , Odile Sismeiro , Hugo Varet , Jean-Yves Coppée , et al.
Research in Microbiology, 2023, 174 (1-2), pp.103997. ⟨10.1016/j.resmic.2022.103997⟩
Article dans une revue pasteur-03889562v1
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Interplay between Sublethal Aminoglycosides and Quorum Sensing: Consequences on Survival in V. cholerae

 André Carvalho , Evelyne Krin , Chloé Korlowski , Didier Mazel , Zeynep Baharoglu
Cells, 2021, 10 (11), pp.3227. ⟨10.3390/cells10113227⟩
Article dans une revue pasteur-03443810v2
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A new route for integron cassette dissemination among bacterial genomes

 Céline Loot , Gael A Millot , Egill Richard , Claire Vit , Baptiste Darracq , et al.
2022
Pré-publication, Document de travail pasteur-03826688v1
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Deficiency in cytosine DNA methylation leads to high chaperonin expression and tolerance to aminoglycosides in Vibrio cholerae

 André Carvalho , Didier Mazel , Zeynep Baharoglu
PLoS Genetics, 2021, 17 (10), pp.e1009748. ⟨10.1371/journal.pgen.1009748⟩
Article dans une revue pasteur-03417428v2
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Chromosomal Position of Ribosomal Protein Genes Affects Long-Term Evolution of Vibrio cholerae

 Leticia Larotonda , Damien Mornico , Varun Khanna , Joaquín Bernal-Bayard , Jean-Marc Ghigo , et al.
mBio, 2023, 14 (2), pp.e0343222. ⟨10.1128/mbio.03432-22⟩
Article dans une revue pasteur-04567331v1
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Dynamic stepwise opening of integron attC DNA hairpins by SSB prevents toxicity and ensures functionality

 Maj Svea Grieb , Aleksandra Nivina , Bevan L Cheeseman , Andreas Hartmann , Didier Mazel , et al.
Nucleic Acids Research, 2017, 45 (18), pp.10555-10563. ⟨10.1093/nar/gkx670⟩
Article dans une revue pasteur-01688527v1
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A qnr-plasmid allows aminoglycosides to induce SOS in Escherichia coli

 Anamaria Babosan , David Skurnik , Anaëlle Muggeo , Gerald Pier , Zeynep Baharoglu , et al.
eLife, 2022, 11, ⟨10.7554/eLife.69511⟩
Article dans une revue hal-03919325v1
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Comparative Genomics of Synechococcus elongatus Explains the Phenotypic Diversity of the Strains

 Marie Adomako , Dustin Ernst , Ryan Simkovsky , Yi-Yun Chao , Jingtong Wang , et al.
mBio, 2022, 13 (3), ⟨10.1128/mbio.00862-22⟩
Article dans une revue pasteur-04122004v1
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Unbridled Integrons: A Matter of Host Factors

 Egill Richard , Baptiste Darracq , Céline Loot , Didier Mazel
Cells, 2022, Special Issue "DNA Repair, Genome Stability/Diversity, and Oxidative Stress and Aging, from Bacteria to Human Cells: A Themed Issue in Honor of Prof. Miroslav Radman", 11 (6), pp.925. ⟨10.3390/cells11060925⟩
Article dans une revue pasteur-03610347v1
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RavA‐ViaA antibiotic response is linked to Cpx and Zra2 envelope stress systems in Vibrio cholerae

 Evelyne Krin , André Carvalho , Manon Lang , Anamaria Babosan , Didier Mazel , et al.
Microbiology Spectrum, 2023, 11 (6), pp.e01730-23. ⟨10.1128/spectrum.01730-23⟩
Article dans une revue pasteur-04260034v1
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Queuosine modification of tRNA-Tyrosine elicits translational reprogramming and enhances growth of Vibrio cholerae with aminoglycosides

 Louna Fruchard , Anamaria Babosan , Andre Carvalho , Manon Lang , Blaise Li , et al.
2022
Pré-publication, Document de travail pasteur-04093412v1
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Measuring single-cell susceptibility to antibiotics within monoclonal bacterial populations

 Lena Le Quellec , Andrey Aristov , Salomé Gutiérrez Ramos , Gabriel Amselem , Julia Bos , et al.
PLoS ONE, 2024, 19 (8), pp.e0303630. ⟨10.1371/journal.pone.0303630⟩
Article dans une revue pasteur-04739933v2
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Étude du mécanisme de synchronisation de la réplication des deux chromosomes de Vibrio cholerae

 Théophile Niault
Biochimie [q-bio.BM]. Sorbonne Université, 2023. Français. ⟨NNT : 2023SORUS121⟩
Thèse tel-04142724v1
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International congress on transposable elements (ICTE 2024) in Saint Malo: breaking down transposon waves and their impact

 Pascale Lesage , Emilie Brasset , Gael Cristofari , Clément Gilbert , Didier Mazel , et al.
Mobile DNA, 2024, 15 (1), pp.25. ⟨10.1186/s13100-024-00334-9⟩
Article dans une revue hal-04759152v1
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MatP local enrichment delays segregation independently of tetramer formation and septal anchoring in Vibrio cholerae

 Elena Espinosa , Jihane Challita , Jean-Michel Desfontaines , Christophe Possoz , Marie-Eve Val , et al.
2024
Pré-publication, Document de travail hal-04781720v1
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Differential Localization and Functional Specialization of parS Centromere-Like Sites in repABC Replicons of Alphaproteobacteria

 Jakub Czarnecki , Elvira Chapkauskaitse , Julia Bos , Dorota Sentkowska , Paweł Wawrzyniak , et al.
Applied and Environmental Microbiology, 2022, 88 (8), pp.e0020722. ⟨10.1128/aem.00207-22⟩
Article dans une revue hal-04020359v1
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Belt and braces: Two escape ways to maintain the cassette reservoir of large chromosomal integrons

 Egill Richard , Baptiste Darracq , Eloi Littner , Gael Millot , Valentin Conte , et al.
PLoS Genetics, 2024, 20 (4), pp.e1011231. ⟨10.1371/journal.pgen.1011231⟩
Article dans une revue pasteur-04305445v1
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β-lactam antibiotics promote bacterial mutagenesis via an RpoS-mediated reduction in replication fidelity

 A. Gutierrez , L. Laureti , S. Crussard , H. Abida , A. Rodríguez-Rojas , et al.
Nature Communications, 2013, 4, pp.1610. ⟨10.1038/ncomms2607⟩
Article dans une revue pasteur-01691736v1
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