Antimicrobial resistance level and conjugation permissiveness shape plasmid distribution in clinical enterobacteria
Résumé
Conjugative plasmids play a key role in the dissemination of antimicrobial resistance
(AMR) genes across bacterial pathogens. AMR plasmids are widespread in clinical set-
tings, but their distribution is not random, and certain associations between plasmids and
bacterial clones are particularly successful. For example, the globally spread carbapenem
resistance plasmid pOXA-48 can use a wide range of enterobacterial species as hosts, but
it is usually associated with a small number of specific Klebsiella pneumoniae clones. These
successful associations represent an important threat for hospitalized patients. However,
knowledge remains limited about the factors determining AMR plasmid distribution in
clinically relevant bacteria. Here, we combined in vitro and in vivo experimental approaches
to analyze pOXA-48-associated AMR levels and conjugation dynamics in a collection of
wild-type enterobacterial strains isolated from hospitalized patients. Our results revealed
significant variability in these traits across different bacterial hosts, with Klebsiella spp.
strains showing higher pOXA-48-mediated AMR and conjugation frequencies than
Escherichia coli strains. Using experimentally determined parameters, we developed a
simple mathematical model to interrogate the contribution of AMR levels and conjugation
permissiveness to plasmid distribution in bacterial communities. The simulations revealed
that a small subset of clones, combining high AMR levels and conjugation permissiveness,
play a critical role in stabilizing the plasmid in different polyclonal microbial communi-
ties. These results help to explain the preferential association of plasmid pOXA-48 with
K. pneumoniae clones in clinical settings. More generally, our study reveals that species-
and strain-specific variability in plasmid-associated phenotypes shape AMR evolution in
clinically relevant bacterial communities.
Domaines
Sciences du Vivant [q-bio]
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