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authIdHal_s : sandra-duharcourt
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Role of Polycomb in the control of transposable elements

Angélique Déléris , Frédéric Berger , Sandra Duharcourt
Trends in Genetics, 2021, 37 (10), pp.882-889. ⟨10.1016/j.tig.2021.06.003⟩
Journal articles hal-03372798v1

Genome-defence small RNAs exapted for epigenetic mating-type inheritance.

Deepankar Pratap Singh , Baptiste Saudemont , Gérard Guglielmi , Olivier Arnaiz , Jean-François Goût et al.
Stem Cells and Development, 2014, 509 (7501), pp.447-52. ⟨10.1038/nature13318⟩
Journal articles hal-01015302v1
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Universal trends of post-duplication evolution revealed by the genomes of 13 Paramecium species sharing an ancestral whole-genome duplication

Jean-Francois Gout , Parul Johri , Olivier Arnaiz , Thomas Doak , Simran Bhullar et al.
Preprints, Working Papers, ... hal-02990778v1
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Massive colonization of protein-coding exons by selfish genetic elements in Paramecium germline genomes

Diamantis Sellis , Frédéric Guérin , Olivier Arnaiz , Walker Pett , Emmanuelle Lerat et al.
Plos Biology, 2021, 19 (7), pp.e3001309. ⟨10.1371/journal.pbio.3001309⟩
Journal articles hal-03366429v1
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The Paramecium histone chaperone Spt16-1 is required for Pgm endonuclease function in programmed genome rearrangements

Augustin de Vanssay , Amandine Touzeau , Olivier Arnaiz , Andrea Frapporti , Jamie Phipps et al.
PLoS Genetics, 2020, 16 (7), pp.e1008949. ⟨10.1371/journal.pgen.1008949⟩
Journal articles hal-02990752v1

RNA-guided DNA rearrangements in ciliates: Is the best genome defence a good offence?

Robert Coyne , Maoussi Lhuillier-Akakpo , Sandra Duharcourt
Biology of the Cell, 2012, 104 (6), pp.309-325. ⟨10.1111/boc.201100057⟩
Journal articles istex hal-02146988v1

Timing of Developmentally Programmed Excision and Circularization of Paramecium Internal Eliminated Sequences

Mireille Bétermier , Sandra Duharcourt , Hervé Seitz , Eric Meyer
Molecular and Cellular Biology, 2000, 20 (5), pp.1553-1561. ⟨10.1128/mcb.20.5.1553-1561.2000⟩
Journal articles hal-02147003v1

The Paramecium Germline Genome Provides a Niche for Intragenic Parasitic DNA: Evolutionary Dynamics of Internal Eliminated Sequences.

Olivier Arnaiz , Nathalie Mathy , Céline Baudry , Sophie Malinsky , Jean-Marc Aury et al.
PLoS Genetics, 2012, 8 (10), pp.e1002984. ⟨10.1371/journal.pgen.1002984⟩
Journal articles hal-00759182v1
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A universal method for the rapid isolation of all known classes of functional silencing small RNAs

Thomas Grentzinger , Stefan Oberlin , Gregory Schott , Dominik Handler , Julia Svozil et al.
Nucleic Acids Research, 2020, 48 (14), pp.e79-e79. ⟨10.1093/nar/gkaa472⟩
Journal articles hal-02990736v1
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Local Effect of Enhancer of Zeste-Like Reveals Cooperation of Epigenetic and cis-Acting Determinants for Zygotic Genome Rearrangements

Maoussi Lhuillier-Akakpo , Andrea Frapporti , Cyril Denby Wilkes , Mélody Matelot , Michel Vervoort et al.
PLoS Genetics, 2014, 10 (9), pp.e1004665. ⟨10.1371/journal.pgen.1004665⟩
Journal articles hal-01342642v1
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GC content but not nucleosome positioning directly contributes to intron-splicing efficiency in Paramecium

Stefano Gnan , Mélody Matelot , Marion Weiman , Olivier Arnaiz , Frédéric Guérin et al.
Genome Research, 2022, pp.699-709. ⟨10.1101/2021.08.05.455221⟩
Journal articles hal-03400776v1

Flow cytometry sorting of nuclei enables the first global characterization of Paramecium germline DNA and transposable elements

Frédéric Guérin , Olivier Arnaiz , Nicole Boggetto , Cyril Denby Wilkes , Eric Meyer et al.
BMC Genomics, 2017, 18 (1), ⟨10.1186/s12864-017-3713-7⟩
Journal articles hal-02146952v1

TFIIS-Dependent Non-coding Transcription Regulates Developmental Genome Rearrangements.

Kamila Maliszewska-Olejniczak , Julita Gruchota , Robert Gromadka , Cyril Denby Wilkes , Olivier Arnaiz et al.
PLoS Genetics, 2015, 11 (7), pp.e1005383. ⟨10.1371/journal.pgen.1005383⟩
Journal articles hal-01234177v1
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Paramecium Polycomb Repressive Complex 2 physically interacts with the small RNA binding PIWI protein to repress transposable elements

Caridad Miró Pina , Olivia Charmant , Takayuki Kawaguchi , Daniel Holoch , Audrey Michaud et al.
Developmental Cell, 2022, 57 (8), pp.1037-1052.e8. ⟨10.1016/j.devcel.2022.03.014⟩
Journal articles hal-03358389v1

Programmed Rearrangement in Ciliates: Paramecium

Mireille Bétermier , Sandra Duharcourt
Microbiol Spectrum, American Society of Microbiology, pp.369-388, 2014
Book sections hal-02146981v1
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Improved methods and resources for paramecium genomics: transcription units, gene annotation and gene expression

Olivier Arnaiz , Erwin van Dijk , Mireille Bétermier , Maoussi Lhuillier-Akakpo , Augustin de Vanssay et al.
BMC Genomics, 2017, 18, pp.1-12. ⟨10.1186/s12864-017-3887-z⟩
Journal articles hal-01602694v1

DNA deletion as a mechanism for developmentally programmed centromere loss

Maoussi Lhuillier-Akakpo , Frédéric Guérin , Andrea Frapporti , Sandra Duharcourt
Nucleic Acids Research, 2015, ⟨10.1093/nar/gkv1110⟩
Journal articles hal-01267676v1